Figure 5From: Methods of staining and visualization of sphingolipid enriched and non-enriched plasma membrane regions of Arabidopsis thaliana with fluorescent dyes and lipid analoguesCombined dye staining of protoplasts and correlation analyses. There was no polarization detectable in freshly isolated, intact protoplasts. FM4-64 (A) & BD-SM (B) appeared to be homogeneous in the plasma membrane as viewed in the merged image (C) of the protoplast (transmission image (D)). (E-F)The occurrence of lipid polarization was observed 15 h post cell wall removal; (E) FM4-64 fluorescence, (F) BD-SM fluorescence; at the dorsal side there was a depletion of the FM4-64 fluorescence signal detected (E, G (merged image of E and F); arrows) in a viable protoplast (H (transmission image of the protoplast)). In 15 h old protoplasts these findings were confirmed by a combined use of LRB-PE (I) and BD-SM (J). A depletion of the LRB-PE fluorescence signal was also detected (I, K (merged image of I and J); arrows) in intact protoplasts (L (transmission image)). (M): Pearson and Spearman correlation coefficients resulting from two independent ROIs in freshly isolated, FM4-64/BD-SM treated protoplasts. Both coefficients indicated a colocalization of fluorescence signals. (n = 10 protoplasts). (N): In 15 h old protoplasts the determined correlation coefficients showed a decrease between unpolarized regions (ROI1) and polarized regions of the plasma membrane (ROI2). For ROI1 unpolarized regions were determined. ROI2 reflects the correlation of green BD-SM and red FM4-64 fluorescence signals next to ROI1 in unpolarized regions in (M) and in polarized regions (FM4-64 depleted) in (N) of the plasma membrane (n = 10 protoplasts). (See methods and Figure S2 for details of the analysis in M &N).Back to article page