Table 3 Distribution of T-DNA insertions over the 12 rice chromosomes compared with Tos17 insertions
From: FSTVAL: a new web tool to validate bulk flanking sequence tags
Chr. no. | Chr. size (Mb) | T-DNA | Tos17 | ||||
|---|---|---|---|---|---|---|---|
| Â | Â | No of sequences | Ratio (%)a | Average inserts densityb | No of sequences | Ratio (%)a | Average inserts densityb |
1 | 43.6 | 92 | 14% | 0.5 | 485 | 13% | 11.1 |
2 | 35.9 | 78 | 12% | 0.5 | 486 | 12% | 13.0 |
3 | 36.3 | 85 | 13% | 0.4 | 455 | 12% | 12.5 |
4 | 35.2 | 64 | 10% | 0.6 | 355 | 9% | 10.1 |
5 | 29.9 | 27 | 4% | 1.1 | 331 | 9% | 11.1 |
6 | 31.2 | 40 | 6% | 0.8 | 309 | 8% | 9.9 |
7 | 29.7 | 49 | 8% | 0.6 | 278 | 7% | 9.4 |
8 | 28.3 | 51 | 8% | 0.6 | 283 | 7% | 10.0 |
9 | 23 | 42 | 7% | 0.5 | 205 | 5% | 8.9 |
10 | 22.9 | 39 | 6% | 0.6 | 157 | 4% | 6.9 |
11 | 28.5 | 43 | 7% | 0.7 | 244 | 6% | 8.6 |
12 | 27.5 | 31 | 5% | 0.9 | 204 | 5% | 7.4 |
Total | 372.1 | 641 | 100% | 0.6 | 3774 | 100% | 10.1 |