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Table 2 Frequencies of T-DNA insertions in the genic and intergenic regions compared with Tos17

From: FSTVAL: a new web tool to validate bulk flanking sequence tags

Type of sequences   T-DNA Tos17
   No of sequence Ratio (%) No of sequence Ratio (%)
Genic   273 41.8% 2,350 60.3%
  Exon 53 8.1% 1,029 26.4%
  intron 56 8.9% 714 18.4%
  5'Upstream(−1,000 bp) 138 21.1% 429 11.0%
  3'Downstream(+300 bp) 26 4.0% 178 4.5%
Intergenic   368 56.4% 1,424 36.6%
Repeat (>1)   12 1.8% 120 3.1%
Total   653 100.0% 3,895 100.0%