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Table 1 Nucleotide changes in BraA.cax1.a and BraA.met1.a TILLING mutants.

From: High Resolution Melt (HRM) analysis is an efficient tool to genotype EMS mutants in complex crop genomes

Linea

Mutation Changeb

Position (base-pair)c

Position (amino-acid)d

Type of mutatione

BraA.cax1.a-1

G to A

881

-

Non-coding

BraA.cax1.a-2

C to T

860

-

Non-coding

BraA.cax1.a-3

G to A

545

2

Non-coding

BraA.cax1.a-4

G to A

771

77

Missense

BraA.cax1.a-5

C to T

494

-

Non-coding

BraA.cax1.a-6

G to A

517

-

Non-coding

BraA.cax1.a-7

G to A

673

44

Missense

BraA.cax1.a-8

G to A

599

19

Missense

BraA.cax1.a-9

G to A

645

35

Missense

BraA.cax1.a-10

C to T

736

65

Missense

BraA.cax1.a-11

G to A

795

85

Missense

BraA.cax1.a-12

C to T

708

56

Missense

BraA.cax1.a-13

C to T

689

49

Silent

BraA.cax1.a-14

C to T

661

40

Missense

BraA.cax1.a-15

C to T

658

39

Missense

BraA.cax1.a-16

C to T

421

-

Non-coding

BraA.cax1.a-17

G to A

926

-

Non-coding

BraA.cax1.a-18

C to T

818

92

Silent

BraA.cax1.a-19

C to T

732

64

Missense

BraA.cax1.a-20

C to T

690

50

Nonsense

BraA.met1.a-1

C to T

3516

248

Silent

BraA.met1.a-2

G to A

3334

188

Missense

BraA.met1.a-3

G to A

3334

188

Missense

BraA.met1.a-4

G to A

3084

104

Silent

BraA.met1.a-5

C to T

3081

103

Silent

BraA.met1.a-6

G to A

3252

243

Nonsense

BraA.met1.a-7

G to A

3500

243

Missense

BraA.met1.a-8

G to A

3012

80

Silent

BraA.met1.a-9

G to A

3495

241

Silent

BraA.met1.a-10

C to T

3335

188

Missense

BraA.met1.a-11

C to T

3069

99

Silent

BraA.met1.a-12

G to A

3330

186

Silent

BraA.met1.a-13

C to T

3324

184

Silent

BraA.met1.a-14

G to A

3213

147

Nonsense

BraA.met1.a-15

C to T

3265

165

Silent

BraA.met1.a-16

G to A

3330

186

Silent

BraA.met1.a-17

G to A

3258

162

Silent

  1. a - TILLING line, b - Nucleotide change in mutant line, c - Position of nucleotide change in base-pairs, d - Position of amino-acid change in peptide, e - Type of mutation caused by nucleotide change. Non-coding - nucleotide change not within coding region, missense - nucleotide change results in an amino-acid change, nonsense - nucleotide change results in the introduction of a premature stop codon, silent - no change in amino-acid.