An efficient procedure for plant organellar genome assembly, based on whole genome data from the 454 GS FLX sequencing platform

Table 1 Data summary of Roche/454 GS FLX sequencing

Data ID	Reads number	Data (Mbp)	Mean read Length (bp)	^aRead peak quality	^bDuplication ratio	^cUseful ratio
A01	713,423	255	357.2	30.4	0.07	0.96
A02	598,465	224	373.6	31.52	0.13	0.93
B01	706,828	214	302.7	30.01	0.08	0.96
B02	452,778	142	314.4	30.1	0.04	0.97
C01	653,516	239	366	31.41	0.07	0.96
C02	237,259	71	300.1	31.29	0.28	0.77
D01	506,602	157	309.7	30.37	0.06	0.97
E01	263,521	103	392.4	32.01	0.2	0.88
Total	4,132,392	1,405	339.5	30.89	0.12	0.93

^aThe means of the read qualities.
^b Duplicate is a group of reads whose first 50 bp sequences are identical. Duplication ratio is the number of duplicates over the total number of reads.
^c Useful ratio is the ratio of unique reads (reads that are different in the 50 bp sequences) and the longest reads in every duplicate over the total number of reads.

ISSN: 1746-4811