TY - BOOK AU - Harris, E. H. PY - 2008 DA - 2008// TI - The Chlamydomonas Sourcebook: Introduction to Chlamydomonas and Its Laboratory Use PB - Elsevier/Academic Press CY - San Diego, CA ID - Harris2008 ER - TY - JOUR AU - Merchant, S. S. AU - Prochnik, S. E. AU - Vallon, O. AU - Harris, E. H. AU - Karpowicz, S. J. AU - Witman, G. B. AU - Terry, A. AU - Salamov, A. AU - Fritz-Laylin, L. K. AU - Marechal-Drouard, L. PY - 2007 DA - 2007// TI - The Chlamydomonas genome reveals the evolution of key animal and plant functions JO - Science VL - 318 UR - https://doi.org/10.1126/science.1143609 DO - 10.1126/science.1143609 ID - Merchant2007 ER - TY - JOUR AU - Cerutti, H. AU - Johnson, A. M. AU - Gillham, N. W. AU - Boynton, J. E. PY - 1997 DA - 1997// TI - Epigenetic silencing of a foreign gene in nuclear transformants of Chlamydomonas JO - Plant Cell VL - 9 UR - https://doi.org/10.1105/tpc.9.6.925 DO - 10.1105/tpc.9.6.925 ID - Cerutti1997 ER - TY - JOUR AU - Zhang, C. AU - Wu-Scharf, D. AU - Jeong, B. R. AU - Cerutti, H. PY - 2002 DA - 2002// TI - A WD40-repeat containing protein, similar to a fungal co-repressor, is required for transcriptional gene silencing in Chlamydomonas JO - Plant J VL - 31 UR - https://doi.org/10.1046/j.1365-313X.2002.01331.x DO - 10.1046/j.1365-313X.2002.01331.x ID - Zhang2002 ER - TY - JOUR AU - van Dijk, K. AU - Marley, K. E. AU - Jeong, B. R. AU - Xu, J. AU - Hesson, J. AU - Cerny, R. L. AU - Waterborg, J. H. AU - Cerutti, H. PY - 2005 DA - 2005// TI - Monomethyl histone H3 lysine 4 as an epigenetic mark for silenced euchromatin in Chlamydomonas JO - Plant Cell VL - 17 UR - https://doi.org/10.1105/tpc.105.034165 DO - 10.1105/tpc.105.034165 ID - van Dijk2005 ER - TY - JOUR AU - Casas-Mollano, J. A. AU - van Dijk, K. AU - Eisenhart, J. AU - Cerutti, H. PY - 2007 DA - 2007// TI - SET3p monomethylates histone H3 on lysine 9 and is required for the silencing of tandemly repeated transgenes in Chlamydomonas JO - Nucleic Acids Res VL - 35 UR - https://doi.org/10.1093/nar/gkl1149 DO - 10.1093/nar/gkl1149 ID - Casas-Mollano2007 ER - TY - JOUR AU - Casas-Mollano, J. A. AU - Jeong, B. R. AU - Xu, J. AU - Moriyama, H. AU - Cerutti, H. PY - 2008 DA - 2008// TI - The MUT9p kinase phosphorylates histone H3 threonine 3 and is necessary for heritable epigenetic silencing in Chlamydomonas JO - Proc Natl Acad Sci USA VL - 105 UR - https://doi.org/10.1073/pnas.0711310105 DO - 10.1073/pnas.0711310105 ID - Casas-Mollano2008 ER - TY - JOUR AU - Shaver, S. AU - Casas-Mollano, J. A. AU - Cerny, R. L. AU - Cerutti, H. PY - 2010 DA - 2010// TI - Origin of the polycomb repressive complex 2 and gene silencing by an E(z) homolog in the unicellular alga Chlamydomonas JO - Epigenetics VL - 5 UR - https://doi.org/10.4161/epi.5.4.11608 DO - 10.4161/epi.5.4.11608 ID - Shaver2010 ER - TY - JOUR AU - Yamasaki, T. AU - Miyasaka, H. AU - Ohama, T. PY - 2008 DA - 2008// TI - Unstable RNAi effects through epigenetic silencing of an inverted repeat transgene in Chlamydomonas reinhardtii JO - Genetics VL - 180 UR - https://doi.org/10.1534/genetics.108.092395 DO - 10.1534/genetics.108.092395 ID - Yamasaki2008 ER - TY - JOUR AU - Yamasaki, T. AU - Ohama, T. PY - 2011 DA - 2011// TI - Involvement of Elongin C in the spread of repressive histone modifications JO - Plant J VL - 65 UR - https://doi.org/10.1111/j.1365-313X.2010.04400.x DO - 10.1111/j.1365-313X.2010.04400.x ID - Yamasaki2011 ER - TY - JOUR AU - Kropat, J. AU - Tottey, S. AU - Birkenbihl, R. P. AU - Depège, N. AU - Huijser, P. AU - Merchant, S. PY - 2005 DA - 2005// TI - A regulator of nutritional copper signaling in Chlamydomonas is an SBP domain protein that recognizes the GTAC core of copper response element JO - Proc Natl Acad Sci USA VL - 102 UR - https://doi.org/10.1073/pnas.0507693102 DO - 10.1073/pnas.0507693102 ID - Kropat2005 ER - TY - JOUR AU - Wykoff, D. D. AU - Grossman, A. R. AU - Weeks, D. P. AU - Usuda, H. AU - Shimogawara, K. PY - 1999 DA - 1999// TI - Psr1, a nuclear localized protein that regulates phosphorus metabolism in Chlamydomonas JO - Proc Natl Acad Sci USA VL - 96 UR - https://doi.org/10.1073/pnas.96.26.15336 DO - 10.1073/pnas.96.26.15336 ID - Wykoff1999 ER - TY - JOUR AU - Xiang, Y. AU - Zhang, J. AU - Weeks, D. P. PY - 2001 DA - 2001// TI - The Cia5 gene controls formation of the carbon concentrating mechanism in Chlamydomonas reinhardtii JO - Proc Natl Acad Sci USA VL - 98 UR - https://doi.org/10.1073/pnas.101534498 DO - 10.1073/pnas.101534498 ID - Xiang2001 ER - TY - JOUR AU - Fukuzawa, H. AU - Miura, K. AU - Ishizaki, K. AU - Kucho, K. I. AU - Saito, T. AU - Kohinata, T. AU - Ohyama, K. PY - 2001 DA - 2001// TI - Ccm1, a regulatory gene controlling the induction of a carbon-concentrating mechanism in Chlamydomonas reinhardtii by sensing CO2 availability JO - Proc Natl Acad Sci USA VL - 98 UR - https://doi.org/10.1073/pnas.081593498 DO - 10.1073/pnas.081593498 ID - Fukuzawa2001 ER - TY - JOUR AU - Schulz-Raffelt, M. AU - Lodha, M. AU - Schroda, M. PY - 2007 DA - 2007// TI - Heat shock factor 1 is a key regulator of the stress response in Chlamydomonas JO - Plant J VL - 52 UR - https://doi.org/10.1111/j.1365-313X.2007.03228.x DO - 10.1111/j.1365-313X.2007.03228.x ID - Schulz-Raffelt2007 ER - TY - JOUR AU - Strenkert, D. AU - Schmollinger, S. AU - Sommer, F. AU - Schulz-Raffelt, M. AU - Schroda, M. PY - 2011 DA - 2011// TI - Transcription factor dependent chromatin remodeling at heat shock and copper responsive promoters in Chlamydomonas reinhardtii JO - Plant Cell VL - 23 UR - https://doi.org/10.1105/tpc.111.085266 DO - 10.1105/tpc.111.085266 ID - Strenkert2011 ER - TY - JOUR AU - Solomon, M. J. AU - Larsen, P. L. AU - Varshavsky, A. PY - 1988 DA - 1988// TI - Mapping protein-DNA interactions in vivo with formaldehyde: evidence that histone H4 is retained on a highly transcribed gene JO - Cell VL - 53 UR - https://doi.org/10.1016/S0092-8674(88)90469-2 DO - 10.1016/S0092-8674(88)90469-2 ID - Solomon1988 ER - TY - JOUR AU - Pokholok, D. K. AU - Harbison, C. T. AU - Levine, S. AU - Cole, M. AU - Hannett, N. M. AU - Lee, T. I. AU - Bell, G. W. AU - Walker, K. AU - Rolfe, P. A. AU - Herbolsheimer, E. PY - 2005 DA - 2005// TI - Genome-wide map of nucleosome acetylation and methylation in yeast JO - Cell VL - 122 UR - https://doi.org/10.1016/j.cell.2005.06.026 DO - 10.1016/j.cell.2005.06.026 ID - Pokholok2005 ER - TY - STD TI - Guertin MJ, Lis JT: Chromatin landscape dictates HSF binding to target DNA elements. PLoS Genet. 6- ID - ref19 ER - TY - JOUR AU - Dedon, P. C. AU - Soults, J. A. AU - Allis, C. D. AU - Gorovsky, M. A. PY - 1991 DA - 1991// TI - A simplified formaldehyde fixation and immunoprecipitation technique for studying protein-DNA interactions JO - Anal Biochem VL - 197 UR - https://doi.org/10.1016/0003-2697(91)90359-2 DO - 10.1016/0003-2697(91)90359-2 ID - Dedon1991 ER - TY - JOUR AU - Orlando, V. AU - Strutt, H. AU - Paro, R. PY - 1997 DA - 1997// TI - Analysis of chromatin structure by in vivo formaldehyde cross-linking JO - Methods VL - 11 UR - https://doi.org/10.1006/meth.1996.0407 DO - 10.1006/meth.1996.0407 ID - Orlando1997 ER - TY - JOUR AU - Hecht, A. AU - Grunstein, M. PY - 1999 DA - 1999// TI - Mapping DNA interaction sites of chromosomal proteins using immunoprecipitation and polymerase chain reaction JO - Methods Enzymol VL - 304 UR - https://doi.org/10.1016/S0076-6879(99)04024-0 DO - 10.1016/S0076-6879(99)04024-0 ID - Hecht1999 ER - TY - JOUR AU - Das, P. M. AU - Ramachandran, K. AU - van Wert, J. AU - Singal, R. PY - 2004 DA - 2004// TI - Chromatin immunoprecipitation assay JO - Biotechniques VL - 37 ID - Das2004 ER - TY - JOUR AU - Bowler, C. AU - Benvenuto, G. AU - Laflamme, P. AU - Molino, D. AU - Probst, A. V. AU - Tariq, M. AU - Paszkowski, J. PY - 2004 DA - 2004// TI - Chromatin techniques for plant cells JO - Plant J VL - 39 UR - https://doi.org/10.1111/j.1365-313X.2004.02169.x DO - 10.1111/j.1365-313X.2004.02169.x ID - Bowler2004 ER - TY - JOUR AU - Haring, M. AU - Offermann, S. AU - Danker, T. AU - Horst, I. AU - Peterhansel, C. AU - Stam, M. PY - 2007 DA - 2007// TI - Chromatin immunoprecipitation: optimization, quantitative analysis and data normalization JO - Plant Methods VL - 3 UR - https://doi.org/10.1186/1746-4811-3-11 DO - 10.1186/1746-4811-3-11 ID - Haring2007 ER - TY - JOUR AU - Ricardi, M. M. AU - Gonzalez, R. M. AU - Iusem, N. D. PY - 2010 DA - 2010// TI - Protocol: fine-tuning of a Chromatin Immunoprecipitation (ChIP) protocol in tomato JO - Plant Methods VL - 6 UR - https://doi.org/10.1186/1746-4811-6-11 DO - 10.1186/1746-4811-6-11 ID - Ricardi2010 ER - TY - JOUR AU - Casas-Mollano, J. A. AU - Rohr, J. AU - Kim, E. J. AU - Balassa, E. AU - van Dijk, K. AU - Cerutti, H. PY - 2008 DA - 2008// TI - Diversification of the core RNA interference machinery in Chlamydomonas reinhardtii and the role of DCL1 in transposon silencing JO - Genetics VL - 179 UR - https://doi.org/10.1534/genetics.107.086546 DO - 10.1534/genetics.107.086546 ID - Casas-Mollano2008 ER - TY - JOUR AU - Schroda, M. AU - Vallon, O. AU - Wollman, F. A. AU - Beck, C. F. PY - 1999 DA - 1999// TI - A chloroplast-targeted heat shock protein 70 (HSP70) contributes to the photoprotection and repair of photosystem II during and after photoinhibition JO - Plant Cell VL - 11 UR - https://doi.org/10.1105/tpc.11.6.1165 DO - 10.1105/tpc.11.6.1165 ID - Schroda1999 ER - TY - JOUR AU - Willmund, F. AU - Schroda, M. PY - 2005 DA - 2005// TI - HEAT SHOCK PROTEIN 90C is a bona fide Hsp90 that interacts with plastidic HSP70B in Chlamydomonas reinhardtii JO - Plant Physiol VL - 138 UR - https://doi.org/10.1104/pp.105.063578 DO - 10.1104/pp.105.063578 ID - Willmund2005 ER - TY - JOUR AU - Mitchell, B. L. AU - Yasui, Y. AU - Li, C. I. AU - Fitzpatrick, A. L. AU - Lampe, P. D. PY - 2005 DA - 2005// TI - Impact of freeze-thaw cycles and storage time on plasma samples used in mass spectrometry based biomarker discovery projects JO - Cancer Inform VL - 1 ID - Mitchell2005 ER - TY - JOUR AU - Chua, Y. L. AU - Brown, A. P. AU - Gray, J. C. PY - 2001 DA - 2001// TI - Targeted histone acetylation and altered nuclease accessibility over short regions of the pea plastocyanin gene JO - Plant Cell VL - 13 UR - https://doi.org/10.1105/tpc.13.3.599 DO - 10.1105/tpc.13.3.599 ID - Chua2001 ER - TY - JOUR AU - Lodha, M. AU - Schroda, M. PY - 2005 DA - 2005// TI - Analysis of chromatin structure in the control regions of the Chlamydomonas HSP70A and RBCS2 genes JO - Plant Mol Biol VL - 59 UR - https://doi.org/10.1007/s11103-005-0450-0 DO - 10.1007/s11103-005-0450-0 ID - Lodha2005 ER - TY - JOUR AU - Arrigo, P. PY - 1983 DA - 1983// TI - Acetylation and methylation patterns of core histones are modified after heat or arsenite treatment of Drosophila tissue culture cells JO - Nucleic Acids Res VL - 11 UR - https://doi.org/10.1093/nar/11.5.1389 DO - 10.1093/nar/11.5.1389 ID - Arrigo1983 ER -