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Table 5 Results of DArT clone redundancy analysis based on DNA sequencing of clones selected from the nine bins that had at least 30 clones per bin, based on Hamming distance of zero (no difference in scoring pattern between markers in the bin)

From: A high-density Diversity Arrays Technology (DArT) microarray for genome-wide genotyping in Eucalyptus

Bin # No. of clones per bin based on Hamming distance No. of clones selected for re-arraying and sequencing No. of re-arrayed clones with unique DNA sequences % of re-arrayed clones with unique DNA sequences
1 116 33 19 57.6
2 75 20 12 60
3 59 17 8 47.1
4 43 13 6 46.2
5 41 6 4 66.7
6 39 10 5 50
7 37 16 11 68.8
8 31 10 6 60
9 30 9 2 22.2
Average 52.3 14.8 8.1 53.2