Skip to main content

Table 3 Summary of VIGS-ESTs from methyljasmonate-treated roots of N. benthamiana

From: Optimized cDNA libraries for virus-induced gene silencing (VIGS) using tobacco rattle virus

Number of ESTs for each cDNA library:

NBREL1

1920

 

NBLEL2

1920

Total number of ESTs

 

3840

Number of high-quality ESTsa

 

2948

Average length of high-quality ESTs (bp)

 

290

Number of contigs

 

364

Number of singletons

 

1327

Number of putative unique transcriptsb

 

1691

  1. a After removal of vector, low-quality, poly(A/T) and simple repeats.
  2. b Number of unique transcripts is the number of contigs and singletons.