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Table 2 List of primers and T-DNA lines used

From: A rapid and versatile combined DNA/RNA extraction protocol and its application to the analysis of a novel DNA marker set polymorphic between Arabidopsis thaliana ecotypes Col-0 and Landsberg erecta

Species/gene

T-DNA knockout

Primer No

Primer (5'-3')

AtSOC1

  

GGATCGAGTCAGCACCAAACC

CTTGAAGAACAAGGTAACCCA

AtAGC1-10

  

CGTTTCACTATCTCCTCCACAAG

GGTGCTTTCAGAATGTTTACTAACGT

AtWRKY22

SALK_098205

2003

2004

AAGAAAGTGTGCCATGTAGCAG

CCGGAGACGATGAATAAGTAGC

AtWRKY46

GABI-Kat 038C07

182

712

ATGGAGGAGGTTCTAGCGAGAGTC

AAACGTCTTTACCATCATCAAGC

AtWRKY53

SALK_034157

713

714

ACGAATTGGAACTAGGGAAAGAG

CCATCATCAATAGAGCCATTTTC

AtWRKY36

GABI-Kat 258B10

72

136

CCTGCCTACAAAGATCATCTAGTTTCG

ATGATCAAAGAGGAGACCGTTTC

AtWRKY70

GABI-Kat 752F08

 

ATGGATACTAATAAAGCAAAAAAGC

AGATAGATTCGAACATGAACTGAAG

AtWRKY18

GABI-Kat 328G03

 

CATGGGTTCATTTCAAATTTTCG

CGATCTGCTCATGTTGCTGATGATG

NtCDPK2

  

ATGGGCAACGCATGCGGCGG

GATGACTCTCAAAGCCATTTTC

NtRBCS

  

CCTCTGCAGCAGTTGCCACC

CCTGTGGGTATGCCTTCTTC

Hordeum vulgare

 

28-12A

ATACCTGCACAGCCACAAGTC

GCAACTTCGCCTCTACGTTC

Hordeum vulgare

 

29-19A

ACATGTGAGCTTGCTGGTTG

TGGGGGATGGTTAATGGTAG

Hordeum vulgare

 

33-22A

CCTGCCGATGTAATCTGGTT

GATCTTTGCCATGTCTGTTTCG

Hordeum vulgare

 

41-30A

AACATGCAAGCACACGTCAT

CATGATTGCTGTGGCTGACT